nlpmed_portal.nlp package

Subpackages

• nlpmed_portal.nlp.api package
  • Submodules
    • nlpmed_portal.nlp.api.router module
    • nlpmed_portal.nlp.api.serializers module
      • EscapedNewlineCharField
        • EscapedNewlineCharField.get_initial()
        • EscapedNewlineCharField.to_internal_value()
      • EncodingFixerSerializer
        • EncodingFixerSerializer.Meta
          • EncodingFixerSerializer.Meta.model
          • EncodingFixerSerializer.Meta.fields
          • EncodingFixerSerializer.Meta.extra_kwargs
      • PatternReplacerSerializer
        • PatternReplacerSerializer.Meta
          • PatternReplacerSerializer.Meta.model
          • PatternReplacerSerializer.Meta.fields
          • PatternReplacerSerializer.Meta.extra_kwargs
      • WordMaskerSerializer
        • WordMaskerSerializer.Meta
          • WordMaskerSerializer.Meta.model
          • WordMaskerSerializer.Meta.fields
          • WordMaskerSerializer.Meta.extra_kwargs
      • NoteFilterSerializer
        • NoteFilterSerializer.Meta
          • NoteFilterSerializer.Meta.model
          • NoteFilterSerializer.Meta.fields
          • NoteFilterSerializer.Meta.extra_kwargs
      • SectionSplitterSerializer
        • SectionSplitterSerializer.Meta
          • SectionSplitterSerializer.Meta.model
          • SectionSplitterSerializer.Meta.fields
          • SectionSplitterSerializer.Meta.extra_kwargs
      • SectionFilterSerializer
        • SectionFilterSerializer.Meta
          • SectionFilterSerializer.Meta.model
          • SectionFilterSerializer.Meta.fields
          • SectionFilterSerializer.Meta.extra_kwargs
      • SentenceSegmenterSerializer
        • SentenceSegmenterSerializer.Meta
          • SentenceSegmenterSerializer.Meta.model
          • SentenceSegmenterSerializer.Meta.fields
          • SentenceSegmenterSerializer.Meta.extra_kwargs
      • DuplicateCheckerSerializer
        • DuplicateCheckerSerializer.Meta
          • DuplicateCheckerSerializer.Meta.model
          • DuplicateCheckerSerializer.Meta.fields
          • DuplicateCheckerSerializer.Meta.extra_kwargs
      • SentenceFilterSerializer
        • SentenceFilterSerializer.Meta
          • SentenceFilterSerializer.Meta.model
          • SentenceFilterSerializer.Meta.fields
          • SentenceFilterSerializer.Meta.extra_kwargs
      • SentenceExpanderSerializer
        • SentenceExpanderSerializer.Meta
          • SentenceExpanderSerializer.Meta.model
          • SentenceExpanderSerializer.Meta.fields
          • SentenceExpanderSerializer.Meta.extra_kwargs
      • JoinerSerializer
        • JoinerSerializer.Meta
          • JoinerSerializer.Meta.model
          • JoinerSerializer.Meta.fields
          • JoinerSerializer.Meta.extra_kwargs
      • MLInferenceSerializer
        • MLInferenceSerializer.Meta
          • MLInferenceSerializer.Meta.model
          • MLInferenceSerializer.Meta.fields
          • MLInferenceSerializer.Meta.extra_kwargs
      • NLPSettingSerializer
        • NLPSettingSerializer.Meta
          • NLPSettingSerializer.Meta.model
          • NLPSettingSerializer.Meta.fields
          • NLPSettingSerializer.Meta.extra_kwargs
      • NLPSerializer
        • NLPSerializer.Meta
          • NLPSerializer.Meta.fields
        • NLPSerializer.to_internal_value()
      • NlpProcessJobSerializer
        • NlpProcessJobSerializer.Meta
          • NlpProcessJobSerializer.Meta.model
          • NlpProcessJobSerializer.Meta.fields
          • NlpProcessJobSerializer.Meta.read_only_fields
      • DemoSerializer
        • DemoSerializer.to_internal_value()
    • nlpmed_portal.nlp.api.views module
      • MethodBasePermission
        • MethodBasePermission.has_permission()
      • NLPViewSet
        • NLPViewSet.serializer_class
        • NLPViewSet.permission_classes
        • NLPViewSet.required_perms
        • NLPViewSet.create()
        • NLPViewSet.basename
        • NLPViewSet.description
        • NLPViewSet.detail
        • NLPViewSet.name
        • NLPViewSet.suffix
      • NlpProcessJobViewSet
        • NlpProcessJobViewSet.queryset
        • NlpProcessJobViewSet.serializer_class
        • NlpProcessJobViewSet.permission_classes
        • NlpProcessJobViewSet.required_perms
        • NlpProcessJobViewSet.create()
        • NlpProcessJobViewSet.basename
        • NlpProcessJobViewSet.description
        • NlpProcessJobViewSet.detail
        • NlpProcessJobViewSet.name
        • NlpProcessJobViewSet.suffix
      • VteBertDemoViewSet
        • VteBertDemoViewSet.serializer_class
        • VteBertDemoViewSet.permission_classes
        • VteBertDemoViewSet.create()
        • VteBertDemoViewSet.basename
        • VteBertDemoViewSet.description
        • VteBertDemoViewSet.detail
        • VteBertDemoViewSet.name
        • VteBertDemoViewSet.suffix
      • BleedBertDemoViewSet
        • BleedBertDemoViewSet.serializer_class
        • BleedBertDemoViewSet.permission_classes
        • BleedBertDemoViewSet.create()
        • BleedBertDemoViewSet.basename
        • BleedBertDemoViewSet.description
        • BleedBertDemoViewSet.detail
        • BleedBertDemoViewSet.name
        • BleedBertDemoViewSet.suffix

Submodules

• nlpmed_portal.nlp.admin module
  • EncodingFixerInline
    • EncodingFixerInline.model
    • EncodingFixerInline.form
    • EncodingFixerInline.extra
    • EncodingFixerInline.media
  • PatternReplacerInline
    • PatternReplacerInline.model
    • PatternReplacerInline.form
    • PatternReplacerInline.extra
    • PatternReplacerInline.media
  • WordMaskerInline
    • WordMaskerInline.model
    • WordMaskerInline.form
    • WordMaskerInline.extra
    • WordMaskerInline.media
  • NoteFilterInline
    • NoteFilterInline.model
    • NoteFilterInline.form
    • NoteFilterInline.extra
    • NoteFilterInline.media
  • SectionSplitterInline
    • SectionSplitterInline.model
    • SectionSplitterInline.form
    • SectionSplitterInline.extra
    • SectionSplitterInline.media
  • SectionFilterInline
    • SectionFilterInline.model
    • SectionFilterInline.form
    • SectionFilterInline.extra
    • SectionFilterInline.media
  • SentenceSegmenterInline
    • SentenceSegmenterInline.model
    • SentenceSegmenterInline.form
    • SentenceSegmenterInline.extra
    • SentenceSegmenterInline.media
  • DuplicateCheckerInline
    • DuplicateCheckerInline.model
    • DuplicateCheckerInline.form
    • DuplicateCheckerInline.extra
    • DuplicateCheckerInline.media
  • SentenceFilterInline
    • SentenceFilterInline.model
    • SentenceFilterInline.form
    • SentenceFilterInline.extra
    • SentenceFilterInline.media
  • SentenceExpanderInline
    • SentenceExpanderInline.model
    • SentenceExpanderInline.form
    • SentenceExpanderInline.extra
    • SentenceExpanderInline.media
  • JoinerInline
    • JoinerInline.model
    • JoinerInline.form
    • JoinerInline.extra
    • JoinerInline.media
  • MLInferenceInline
    • MLInferenceInline.model
    • MLInferenceInline.form
    • MLInferenceInline.extra
    • MLInferenceInline.media
  • NLPSettingInline
    • NLPSettingInline.model
    • NLPSettingInline.extra
    • NLPSettingInline.inlines
    • NLPSettingInline.media
  • NLPSettingAdmin
    • NLPSettingAdmin.inlines
    • NLPSettingAdmin.media
• nlpmed_portal.nlp.apps module
  • NLPConfig
    • NLPConfig.default_auto_field
    • NLPConfig.name
• nlpmed_portal.nlp.constants module
• nlpmed_portal.nlp.demo_urls module
• nlpmed_portal.nlp.forms module
  • process_multiline_text()
  • MultilineJSONListWidget
    • MultilineJSONListWidget.format_value()
    • MultilineJSONListWidget.value_from_datadict()
    • MultilineJSONListWidget.media
  • BaseComponentForm
    • BaseComponentForm.get_initial_for_field()
    • BaseComponentForm.clean()
    • BaseComponentForm.has_changed()
    • BaseComponentForm.base_fields
    • BaseComponentForm.declared_fields
    • BaseComponentForm.media
  • EncodingFixerForm
    • EncodingFixerForm.Meta
      • EncodingFixerForm.Meta.model
      • EncodingFixerForm.Meta.fields
      • EncodingFixerForm.Meta.widgets
    • EncodingFixerForm.base_fields
    • EncodingFixerForm.declared_fields
    • EncodingFixerForm.media
  • PatternReplacerForm
    • PatternReplacerForm.Meta
      • PatternReplacerForm.Meta.model
      • PatternReplacerForm.Meta.fields
      • PatternReplacerForm.Meta.widgets
    • PatternReplacerForm.base_fields
    • PatternReplacerForm.declared_fields
    • PatternReplacerForm.media
  • WordMaskerForm
    • WordMaskerForm.Meta
      • WordMaskerForm.Meta.model
      • WordMaskerForm.Meta.fields
      • WordMaskerForm.Meta.widgets
    • WordMaskerForm.__init__()
    • WordMaskerForm.base_fields
    • WordMaskerForm.declared_fields
    • WordMaskerForm.media
  • NoteFilterForm
    • NoteFilterForm.Meta
      • NoteFilterForm.Meta.model
      • NoteFilterForm.Meta.fields
      • NoteFilterForm.Meta.widgets
    • NoteFilterForm.__init__()
    • NoteFilterForm.base_fields
    • NoteFilterForm.declared_fields
    • NoteFilterForm.media
  • SectionSplitterForm
    • SectionSplitterForm.Meta
      • SectionSplitterForm.Meta.model
      • SectionSplitterForm.Meta.fields
      • SectionSplitterForm.Meta.widgets
    • SectionSplitterForm.base_fields
    • SectionSplitterForm.declared_fields
    • SectionSplitterForm.media
  • SectionFilterForm
    • SectionFilterForm.Meta
      • SectionFilterForm.Meta.model
      • SectionFilterForm.Meta.fields
      • SectionFilterForm.Meta.widgets
    • SectionFilterForm.__init__()
    • SectionFilterForm.base_fields
    • SectionFilterForm.declared_fields
    • SectionFilterForm.media
  • SentenceSegmenterForm
    • SentenceSegmenterForm.Meta
      • SentenceSegmenterForm.Meta.model
      • SentenceSegmenterForm.Meta.fields
      • SentenceSegmenterForm.Meta.widgets
    • SentenceSegmenterForm.base_fields
    • SentenceSegmenterForm.declared_fields
    • SentenceSegmenterForm.media
  • DuplicateCheckerForm
    • DuplicateCheckerForm.Meta
      • DuplicateCheckerForm.Meta.model
      • DuplicateCheckerForm.Meta.fields
      • DuplicateCheckerForm.Meta.widgets
    • DuplicateCheckerForm.base_fields
    • DuplicateCheckerForm.declared_fields
    • DuplicateCheckerForm.media
  • SentenceFilterForm
    • SentenceFilterForm.Meta
      • SentenceFilterForm.Meta.model
      • SentenceFilterForm.Meta.fields
      • SentenceFilterForm.Meta.widgets
    • SentenceFilterForm.__init__()
    • SentenceFilterForm.base_fields
    • SentenceFilterForm.declared_fields
    • SentenceFilterForm.media
  • SentenceExpanderForm
    • SentenceExpanderForm.Meta
      • SentenceExpanderForm.Meta.model
      • SentenceExpanderForm.Meta.fields
      • SentenceExpanderForm.Meta.widgets
    • SentenceExpanderForm.base_fields
    • SentenceExpanderForm.declared_fields
    • SentenceExpanderForm.media
  • JoinerForm
    • JoinerForm.Meta
      • JoinerForm.Meta.model
      • JoinerForm.Meta.fields
      • JoinerForm.Meta.widgets
    • JoinerForm.base_fields
    • JoinerForm.declared_fields
    • JoinerForm.media
  • MLInferenceForm
    • MLInferenceForm.Meta
      • MLInferenceForm.Meta.model
      • MLInferenceForm.Meta.fields
      • MLInferenceForm.Meta.widgets
    • MLInferenceForm.base_fields
    • MLInferenceForm.declared_fields
    • MLInferenceForm.media
  • NLPForm
    • NLPForm.Meta
      • NLPForm.Meta.model
      • NLPForm.Meta.fields
      • NLPForm.Meta.widgets
    • NLPForm.base_fields
    • NLPForm.declared_fields
    • NLPForm.media
• nlpmed_portal.nlp.models module
  • vte_section_inc_list()
  • vte_section_exc_list()
  • vte_keyword_inc_list()
  • vte_keyword_exc_list()
  • ComponentBase
    • ComponentBase.STATUS_CHOICES
    • ComponentBase.status
    • ComponentBase.Meta
      • ComponentBase.Meta.abstract
    • ComponentBase.get_status_display()
  • NLPSetting
    • NLPSetting.history
    • NLPSetting.debug
    • NLPSetting.project
    • NLPSetting.DoesNotExist
    • NLPSetting.MultipleObjectsReturned
    • NLPSetting.NotUpdated
    • NLPSetting.duplicate_checker
    • NLPSetting.encoding_fixer
    • NLPSetting.id
    • NLPSetting.joiner
    • NLPSetting.ml_inference
    • NLPSetting.note_filter
    • NLPSetting.objects
    • NLPSetting.pattern_replacer
    • NLPSetting.project_id
    • NLPSetting.save_without_historical_record()
    • NLPSetting.section_filter
    • NLPSetting.section_splitter
    • NLPSetting.sentence_expander
    • NLPSetting.sentence_filter
    • NLPSetting.sentence_segmenter
    • NLPSetting.word_masker
  • EncodingFixer
    • EncodingFixer.history
    • EncodingFixer.nlp_setting
    • EncodingFixer.DoesNotExist
    • EncodingFixer.MultipleObjectsReturned
    • EncodingFixer.NotUpdated
    • EncodingFixer.get_status_display()
    • EncodingFixer.id
    • EncodingFixer.nlp_setting_id
    • EncodingFixer.objects
    • EncodingFixer.save_without_historical_record()
    • EncodingFixer.status
  • PatternReplacer
    • PatternReplacer.history
    • PatternReplacer.nlp_setting
    • PatternReplacer.pattern
    • PatternReplacer.target
    • PatternReplacer.DoesNotExist
    • PatternReplacer.MultipleObjectsReturned
    • PatternReplacer.NotUpdated
    • PatternReplacer.get_status_display()
    • PatternReplacer.id
    • PatternReplacer.nlp_setting_id
    • PatternReplacer.objects
    • PatternReplacer.save_without_historical_record()
    • PatternReplacer.status
  • WordMasker
    • WordMasker.history
    • WordMasker.nlp_setting
    • WordMasker.words_to_mask
    • WordMasker.mask_char
    • WordMasker.DoesNotExist
    • WordMasker.MultipleObjectsReturned
    • WordMasker.NotUpdated
    • WordMasker.get_status_display()
    • WordMasker.id
    • WordMasker.nlp_setting_id
    • WordMasker.objects
    • WordMasker.save_without_historical_record()
    • WordMasker.status
  • NoteFilter
    • NoteFilter.history
    • NoteFilter.nlp_setting
    • NoteFilter.words_to_search
    • NoteFilter.DoesNotExist
    • NoteFilter.MultipleObjectsReturned
    • NoteFilter.NotUpdated
    • NoteFilter.get_status_display()
    • NoteFilter.id
    • NoteFilter.nlp_setting_id
    • NoteFilter.objects
    • NoteFilter.save_without_historical_record()
    • NoteFilter.status
  • SectionSplitter
    • SectionSplitter.history
    • SectionSplitter.nlp_setting
    • SectionSplitter.delimiter
    • SectionSplitter.DoesNotExist
    • SectionSplitter.MultipleObjectsReturned
    • SectionSplitter.NotUpdated
    • SectionSplitter.get_status_display()
    • SectionSplitter.id
    • SectionSplitter.nlp_setting_id
    • SectionSplitter.objects
    • SectionSplitter.save_without_historical_record()
    • SectionSplitter.status
  • SectionFilter
    • SectionFilter.history
    • SectionFilter.nlp_setting
    • SectionFilter.section_inc_list
    • SectionFilter.section_exc_list
    • SectionFilter.fallback
    • SectionFilter.DoesNotExist
    • SectionFilter.MultipleObjectsReturned
    • SectionFilter.NotUpdated
    • SectionFilter.get_status_display()
    • SectionFilter.id
    • SectionFilter.nlp_setting_id
    • SectionFilter.objects
    • SectionFilter.save_without_historical_record()
    • SectionFilter.status
  • SentenceSegmenter
    • SentenceSegmenter.history
    • SentenceSegmenter.nlp_setting
    • SentenceSegmenter.model_name
    • SentenceSegmenter.batch_size
    • SentenceSegmenter.DoesNotExist
    • SentenceSegmenter.MultipleObjectsReturned
    • SentenceSegmenter.NotUpdated
    • SentenceSegmenter.get_model_name_display()
    • SentenceSegmenter.get_status_display()
    • SentenceSegmenter.id
    • SentenceSegmenter.nlp_setting_id
    • SentenceSegmenter.objects
    • SentenceSegmenter.save_without_historical_record()
    • SentenceSegmenter.status
  • DuplicateChecker
    • DuplicateChecker.history
    • DuplicateChecker.nlp_setting
    • DuplicateChecker.num_perm
    • DuplicateChecker.sim_threshold
    • DuplicateChecker.length_threshold
    • DuplicateChecker.DoesNotExist
    • DuplicateChecker.MultipleObjectsReturned
    • DuplicateChecker.NotUpdated
    • DuplicateChecker.get_status_display()
    • DuplicateChecker.id
    • DuplicateChecker.nlp_setting_id
    • DuplicateChecker.objects
    • DuplicateChecker.save_without_historical_record()
    • DuplicateChecker.status
  • SentenceFilter
    • SentenceFilter.history
    • SentenceFilter.nlp_setting
    • SentenceFilter.words_to_search
    • SentenceFilter.DoesNotExist
    • SentenceFilter.MultipleObjectsReturned
    • SentenceFilter.NotUpdated
    • SentenceFilter.get_status_display()
    • SentenceFilter.id
    • SentenceFilter.nlp_setting_id
    • SentenceFilter.objects
    • SentenceFilter.save_without_historical_record()
    • SentenceFilter.status
  • SentenceExpander
    • SentenceExpander.history
    • SentenceExpander.nlp_setting
    • SentenceExpander.length_threshold
    • SentenceExpander.DoesNotExist
    • SentenceExpander.MultipleObjectsReturned
    • SentenceExpander.NotUpdated
    • SentenceExpander.get_status_display()
    • SentenceExpander.id
    • SentenceExpander.nlp_setting_id
    • SentenceExpander.objects
    • SentenceExpander.save_without_historical_record()
    • SentenceExpander.status
  • Joiner
    • Joiner.history
    • Joiner.nlp_setting
    • Joiner.sentence_delimiter
    • Joiner.section_delimiter
    • Joiner.DoesNotExist
    • Joiner.MultipleObjectsReturned
    • Joiner.NotUpdated
    • Joiner.get_status_display()
    • Joiner.id
    • Joiner.nlp_setting_id
    • Joiner.objects
    • Joiner.save_without_historical_record()
    • Joiner.status
  • MLInference
    • MLInference.history
    • MLInference.nlp_setting
    • MLInference.model_name
    • MLInference.use_preped_text
    • MLInference.DoesNotExist
    • MLInference.MultipleObjectsReturned
    • MLInference.NotUpdated
    • MLInference.get_model_name_display()
    • MLInference.get_status_display()
    • MLInference.id
    • MLInference.nlp_setting_id
    • MLInference.objects
    • MLInference.save_without_historical_record()
    • MLInference.status
  • NLP
    • NLP.DoesNotExist
    • NLP.MultipleObjectsReturned
    • NLP.NotUpdated
    • NLP.id
    • NLP.objects
  • NlpProcessJob
    • NlpProcessJob.STATUS_CHOICES
    • NlpProcessJob.project
    • NlpProcessJob.user
    • NlpProcessJob.patient_pks
    • NlpProcessJob.job_status
    • NlpProcessJob.total_count
    • NlpProcessJob.completed_count
    • NlpProcessJob.error_message
    • NlpProcessJob.created_at
    • NlpProcessJob.updated_at
    • NlpProcessJob.job_progress
    • NlpProcessJob.mark_in_progress()
    • NlpProcessJob.mark_completed()
    • NlpProcessJob.mark_failed()
    • NlpProcessJob.DoesNotExist
    • NlpProcessJob.MultipleObjectsReturned
    • NlpProcessJob.NotUpdated
    • NlpProcessJob.get_job_status_display()
    • NlpProcessJob.get_next_by_created_at()
    • NlpProcessJob.get_next_by_updated_at()
    • NlpProcessJob.get_previous_by_created_at()
    • NlpProcessJob.get_previous_by_updated_at()
    • NlpProcessJob.id
    • NlpProcessJob.objects
    • NlpProcessJob.project_id
    • NlpProcessJob.user_id
• nlpmed_portal.nlp.task_dispatch module
  • dispatch_nlp_job()
• nlpmed_portal.nlp.tasks module
  • chunked_nlp_master_task()
  • process_patient_chunk()
  • finalize_nlp_job()
• nlpmed_portal.nlp.urls module
• nlpmed_portal.nlp.utils module
  • process_patient_api_call()
  • process_patient_write_db()
• nlpmed_portal.nlp.views module
  • NLPPageView
    • NLPPageView.permission_required
    • NLPPageView.template_name
    • NLPPageView.COMPONENT_MODELS
    • NLPPageView.get_context_data()
    • NLPPageView.dispatch()
  • VteBertDemoPageView
    • VteBertDemoPageView.template_name
    • VteBertDemoPageView.get_context_data()
    • VteBertDemoPageView.dispatch()
  • BleedBertDemoPageView
    • BleedBertDemoPageView.template_name
    • BleedBertDemoPageView.get_context_data()
    • BleedBertDemoPageView.dispatch()